http://jstvz.org/categories/wikipedia/ Recent content in Wikipedia on jstvz.org Hugo -- gohugo.io en-US Mon, 21 Jan 2013 00:00:00 +0000 http://jstvz.org/2013/01/21/first-post/ Mon, 21 Jan 2013 00:00:00 +0000 http://jstvz.org/2013/01/21/first-post/ In lieu of a “Hello World” post, let’s make a figure to illustrate the Wikipedia article on bacterial genome size. Boilerplate and libraries out first: library(grDevices) library(ggplot2) library(plyr) library(taxize) library(knitcitations) Get the data We’ll need data, of course: # Download our tables from NCBI's FTP site. Accessed Mon Jan 21 20:36:36 # PST 2013 prok <- read.table("ftp://ftp.ncbi.nlm.nih.gov/genomes/GENOME_REPORTS/prokaryotes.txt", sep = "\t", comment.char = "!", header = T, stringsAsFactors = F) # Clear missing values ('-') prok.